Hi
Here is a program written by us to let the user perform virtual screening of a database of compounds (.pdbqt/.pdb/.mol2) on to a dataset of proteins (.pdbqt). It helps the user to analyze the result using the concept Ligand Efficiency followed by normalization of the results.
I hope you find it useful..
Link: https://sourceforge.net/projects/audocker/files/
###Go through the manual first###
#### dont forget to post here if you find any bugs in my program####